/*
 * JGO2RDF creates a RDF representation of GAF2 files, which are automatically sourced from GO ftp site.
 * Copyright (C) 2012 Matthew M. Hindle & Artem Lysenko
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program.  If not, see <http://www.gnu.org/licenses/>.
 */

package uk.co.jgo2rdf.goa.model;

import uk.co.jgo2rdf.exception.InvalidValueException;
import uk.co.jgo2rdf.goa.go.OntologyType;

import java.util.Date;

/**
 * @author hindlem
 *         Date: 5/17/11
 *         Time: 10:33 AM
 * @version 0.10
 */
public interface MutableGOAEntry extends GOAEntry {

    public void setDB(String db);

    public void setDBObject_ID(String dbObject_id);

    public void setDBObjectSymbol(String dbObjectSymbol);

    public void setQualifier(String qualifier);

    public void setGO_ID(String go_id) throws InvalidValueException;

    public void addDB_References(String[] db_references);

    public void setEvidenceCode(String evidenceCode);

    public void setWithFrom(String withFrom);

    public void setAspect(OntologyType aspect);

    public void setDBObjectName(String dbObjectName);

    public void setDBObjectSynonym(String dbObjectSynonym);

    public void setDBObjectType(String dbObjectType);

    public void setTaxons(int[] taxons);

    public void setDate(Date date);

    public void setAssignedBy(String assignedBy);

    public void setAnnotation_Extension(String annotation_extension);

    public void setGeneProductFormID(String productID);

}
